STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGP_CAROLIEiJ_P0018753Nuclear body protein SP140-like protein. (108 aa)    
Predicted Functional Partners:
Mroh2a
Maestro heat-like repeat-containing protein family member 2A isoform X1.
  
   
 0.509
Nup210
Nuclear pore membrane glycoprotein 210.
    
 0.508
Gtf3c2
LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 2.
  
  0.482
MGP_CAROLIEiJ_P0052643
annotation not available
  
  0.475
Bcl9
B-cell CLL/lymphoma 9 protein.
    
 
 0.455
Defb36
Beta-defensin 123.
  
     0.450
Pin1
Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1.
    
 
 0.449
Cipc
CLOCK-interacting pacemaker.
  
  
  0.433
Il13ra1
Interleukin-13 receptor subunit alpha-1.
  
    0.429
Ppie
Peptidyl-prolyl isomerase E (cyclophilin E).
    
 0.422
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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