Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bcl9 | MGP_CAROLIEiJ_P0018753 | MGP_CAROLIEiJ_P0059403 | MGP_CAROLIEiJ_P0018753 | B-cell CLL/lymphoma 9 protein. | Nuclear body protein SP140-like protein. | 0.455 |
Cipc | Gtf3c2 | MGP_CAROLIEiJ_P0032950 | MGP_CAROLIEiJ_P0067307 | CLOCK-interacting pacemaker. | LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 2. | 0.411 |
Cipc | MGP_CAROLIEiJ_P0018753 | MGP_CAROLIEiJ_P0032950 | MGP_CAROLIEiJ_P0018753 | CLOCK-interacting pacemaker. | Nuclear body protein SP140-like protein. | 0.433 |
Cipc | Mroh2a | MGP_CAROLIEiJ_P0032950 | MGP_CAROLIEiJ_P0018974 | CLOCK-interacting pacemaker. | Maestro heat-like repeat-containing protein family member 2A isoform X1. | 0.475 |
Defb36 | Gtf3c2 | MGP_CAROLIEiJ_P0055246 | MGP_CAROLIEiJ_P0067307 | Beta-defensin 123. | LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 2. | 0.500 |
Defb36 | MGP_CAROLIEiJ_P0018753 | MGP_CAROLIEiJ_P0055246 | MGP_CAROLIEiJ_P0018753 | Beta-defensin 123. | Nuclear body protein SP140-like protein. | 0.450 |
Gtf3c2 | Cipc | MGP_CAROLIEiJ_P0067307 | MGP_CAROLIEiJ_P0032950 | LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 2. | CLOCK-interacting pacemaker. | 0.411 |
Gtf3c2 | Defb36 | MGP_CAROLIEiJ_P0067307 | MGP_CAROLIEiJ_P0055246 | LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 2. | Beta-defensin 123. | 0.500 |
Gtf3c2 | MGP_CAROLIEiJ_P0018753 | MGP_CAROLIEiJ_P0067307 | MGP_CAROLIEiJ_P0018753 | LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 2. | Nuclear body protein SP140-like protein. | 0.482 |
Il13ra1 | MGP_CAROLIEiJ_P0018753 | MGP_CAROLIEiJ_P0091180 | MGP_CAROLIEiJ_P0018753 | Interleukin-13 receptor subunit alpha-1. | Nuclear body protein SP140-like protein. | 0.429 |
MGP_CAROLIEiJ_P0018753 | Bcl9 | MGP_CAROLIEiJ_P0018753 | MGP_CAROLIEiJ_P0059403 | Nuclear body protein SP140-like protein. | B-cell CLL/lymphoma 9 protein. | 0.455 |
MGP_CAROLIEiJ_P0018753 | Cipc | MGP_CAROLIEiJ_P0018753 | MGP_CAROLIEiJ_P0032950 | Nuclear body protein SP140-like protein. | CLOCK-interacting pacemaker. | 0.433 |
MGP_CAROLIEiJ_P0018753 | Defb36 | MGP_CAROLIEiJ_P0018753 | MGP_CAROLIEiJ_P0055246 | Nuclear body protein SP140-like protein. | Beta-defensin 123. | 0.450 |
MGP_CAROLIEiJ_P0018753 | Gtf3c2 | MGP_CAROLIEiJ_P0018753 | MGP_CAROLIEiJ_P0067307 | Nuclear body protein SP140-like protein. | LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 2. | 0.482 |
MGP_CAROLIEiJ_P0018753 | Il13ra1 | MGP_CAROLIEiJ_P0018753 | MGP_CAROLIEiJ_P0091180 | Nuclear body protein SP140-like protein. | Interleukin-13 receptor subunit alpha-1. | 0.429 |
MGP_CAROLIEiJ_P0018753 | MGP_CAROLIEiJ_P0052643 | MGP_CAROLIEiJ_P0018753 | MGP_CAROLIEiJ_P0052643 | Nuclear body protein SP140-like protein. | annotation not available | 0.475 |
MGP_CAROLIEiJ_P0018753 | Mroh2a | MGP_CAROLIEiJ_P0018753 | MGP_CAROLIEiJ_P0018974 | Nuclear body protein SP140-like protein. | Maestro heat-like repeat-containing protein family member 2A isoform X1. | 0.509 |
MGP_CAROLIEiJ_P0018753 | Nup210 | MGP_CAROLIEiJ_P0018753 | MGP_CAROLIEiJ_P0075020 | Nuclear body protein SP140-like protein. | Nuclear pore membrane glycoprotein 210. | 0.508 |
MGP_CAROLIEiJ_P0018753 | Pin1 | MGP_CAROLIEiJ_P0018753 | MGP_CAROLIEiJ_P0086894 | Nuclear body protein SP140-like protein. | Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1. | 0.449 |
MGP_CAROLIEiJ_P0018753 | Ppie | MGP_CAROLIEiJ_P0018753 | MGP_CAROLIEiJ_P0064236 | Nuclear body protein SP140-like protein. | Peptidyl-prolyl isomerase E (cyclophilin E). | 0.422 |
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