STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cdc73Parafibromin. (531 aa)    
Predicted Functional Partners:
Ctr9
RNA polymerase-associated protein CTR9 homolog.
   
 0.999
Leo1
RNA polymerase-associated protein LEO1 isoform X1.
   
 0.999
Rtf1
RNA polymerase-associated protein RTF1 homolog.
   
 0.998
Paf1
RNA polymerase II-associated factor 1 homolog.
   
 0.996
Wdr61
WD repeat-containing protein 61 isoform X1.
    
 0.996
Supt16
FACT complex subunit SPT16.
   
 0.992
Ssrp1
Structure-specific recognition protein 1.
   
 0.990
Supt5
Transcription elongation factor SPT5 isoform X1.
    
 0.980
Polr2a
DNA-directed RNA polymerase II subunit RPB1.
    
 0.964
Supt6
Transcription elongation factor SPT6.
   
 0.947
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.