STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Atf6Cyclic AMP-dependent transcription factor ATF-6 alpha. (656 aa)    
Predicted Functional Partners:
Hspa5
Endoplasmic reticulum chaperone BiP.
    
 0.997
Ddit3
DNA damage-inducible transcript 3 protein.
   
 0.981
Vapb
Vesicle-associated membrane protein-associated protein B/C.
     
 0.972
Wfs1
Wolframin.
    
 0.947
Mbtps1
Membrane-bound transcription factor site-1 protease.
     
 0.927
Atf6b
Cyclic AMP-dependent transcription factor ATF-6 beta.
    
0.918
Mbtps2
Membrane-bound transcription factor site-2 protease.
     
 0.880
Xbp1
LOW QUALITY PROTEIN: X-box-binding protein 1.
    
 0.865
Hsp90b1
Heat shock protein 90kDa beta.
     
 0.817
Cebpb
CCAAT/enhancer binding protein (C/EBP), beta.
   
 0.775
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.