STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Samd5Sterile alpha motif domain-containing protein 5. (173 aa)    
Predicted Functional Partners:
Epha5
Ephrin type-A receptor 5 isoform X1.
   
 0.970
Sash1
SAM and SH3 domain-containing protein 1 isoform X1.
 
    
 0.595
Epha4
Ephrin type-A receptor 4 isoform X1.
   
 0.549
Zc3h7b
Zinc finger CCCH domain-containing protein 7B isoform X1.
      
 0.463
Samd10
Sterile alpha motif domain containing 10.
      
 0.461
Ephb1
Ephrin type-B receptor 1 isoform X1.
    
 0.430
Adgb
Androglobin isoform X1.
      
 0.429
Samd14
Sterile alpha motif domain-containing protein 14.
      
 0.418
Vwa2
Von Willebrand factor A domain-containing protein 2.
      
 0.414
Ppil4
Peptidyl-prolyl cis-trans isomerase-like 4.
      
 0.400
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.