STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Prf1Perforin 1. (554 aa)    
Predicted Functional Partners:
Gzmb
Granzyme B(G,H).
   
 0.999
LOC110307743
Granzyme A.
   
 0.916
Fasl
Tumor necrosis factor ligand superfamily member 6 isoform X1.
   
 0.861
Klrd1
Killer cell lectin-like receptor subfamily D member 1.
   
 0.828
Il2rb
Interleukin-2 receptor subunit beta.
   
  
 0.822
Nkg7
Protein NKG7.
   
  
 0.815
Cd247
T-cell surface glycoprotein CD3 zeta chain isoform X1.
   
  
 0.768
Ifng
Interferon gamma.
   
  
 0.761
Srgn
Proteoglycan peptide core protein.
    
 
 0.746
Ncam1
Neural cell adhesion molecule 1 isoform X1.
    
 0.746
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.