STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hand1Heart- and neural crest derivatives-expressed protein 1. (216 aa)    
Predicted Functional Partners:
Gata4
Transcription factor GATA-4.
   
 0.723
Nkx2-5
Homeobox protein Nkx-2.5.
   
 
 0.680
Tcf3
Transcription factor E2-alpha isoform X1.
   
 0.635
Gata6
Transcription factor GATA-6.
   
 0.583
Tbx5
T-box transcription factor TBX5.
   
 0.582
Cdx2
Homeobox protein CDX-2 isoform X1.
   
 
 0.582
Foxa2
Forkhead box protein A2, hepatocyte nuclear factor 3-beta.
    
 
 0.562
Gcm1
Chorion-specific transcription factor GCMa.
   
  
 0.561
Tpbpa
Trophoblast-specific protein alpha.
      
 0.560
Isl1
Insulin gene enhancer protein ISL-1 isoform X1.
    
 0.559
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.