STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ift20LOW QUALITY PROTEIN: intraflagellar transport protein 20 homolog. (132 aa)    
Predicted Functional Partners:
Ift57
Intraflagellar transport protein 57 homolog.
    
 0.994
Traf3ip1
TRAF3 interacting protein 1.
    
 0.987
Ift80
Intraflagellar transport protein 80 homolog.
   
 0.981
Ift52
Intraflagellar transport protein 52 homolog.
    
 0.978
Ift46
Intraflagellar transport protein 46 homolog.
  
 
 0.975
MGP_CAROLIEiJ_P0067375
Intraflagellar transport protein 172 homolog.
    
 0.974
Trip11
Thyroid receptor-interacting protein 11 isoform X1.
   
 0.973
Ift88
Intraflagellar transport protein 88 homolog.
   
 0.973
Ift81
Intraflagellar transport protein 81 homolog isoform X1.
    
 0.969
Ift27
Intraflagellar transport protein 27 homolog.
    
 0.968
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.