STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGP_CAROLIEiJ_P0032715annotation not available (372 aa)    
Predicted Functional Partners:
Gtf2a2
Transcription initiation factor IIA subunit 2 isoform X1.
    
 0.997
Tbp
Transcription initiation factor TFIID TATA-box-binding protein.
   
 0.996
Tbpl1
Transcription initiation factor TFIID TATA-box-binding protein.
   
 0.973
Gtf2b
Transcription initiation factor TFIIB.
   
 0.971
Gtf2f2
Transcription initiation factor TFIIF subunit beta.
   
 0.970
Gtf2h4
Transcription initiation factor TFIIH subunit 4.
    
 0.968
Gtf2e1
LOW QUALITY PROTEIN: general transcription factor IIE subunit 1.
    
 0.967
Ercc3
TFIIH basal transcription factor complex helicase XPB subunit isoform X1.
    
 0.964
Gtf2f1
Transcription initiation factor TFIIF subunit alpha.
    
 0.961
Gtf2e2
Transcription initiation factor TFIIE subunit beta.
    
 0.961
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.