STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
1700024P04RikHistone H2B subacrosomal variant. (123 aa)    
Predicted Functional Partners:
LOC110296703
Histone H4.
   
 0.773
H2ax
Histone H2AX.
  
 0.759
Hdac2
Histone deacetylase 1/2.
    
 0.754
Hdac1
Histone deacetylase 1/2.
    
 0.752
Hdac3
Histone deacetylase 3.
    
 0.749
Hdac8
Histone deacetylase 8 isoform X1.
    
 0.749
Hdac6
Histone deacetylase 6.
    
 0.739
Hdac4
Histone deacetylase 4/5.
    
 0.737
Hdac5
Histone deacetylase 5 isoform X1.
    
 0.737
Hdac9
Histone deacetylase 9 isoform X1.
    
 0.737
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.