STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mrps2728S ribosomal protein S27, mitochondrial isoform X1. (415 aa)    
Predicted Functional Partners:
Mrps15
28S ribosomal protein S15, mitochondrial.
   
 0.998
Dap3
28S ribosomal protein S29, mitochondrial.
   
 0.997
Mrps18b
Small subunit ribosomal protein S18b, mitochondrial.
   
 0.991
Mrps16
28S ribosomal protein S16, mitochondrial.
   
 0.989
Ptcd3
Pentatricopeptide repeat domain-containing protein 3, mitochondrial isoform X1.
   
 0.989
Mrps5
28S ribosomal protein S5, mitochondrial.
   
 0.988
Mrps22
28S ribosomal protein S22, mitochondrial.
   
 0.987
Mrps10
28S ribosomal protein S10, mitochondrial isoform X1.
    
 0.985
Mrps28
28S ribosomal protein S28, mitochondrial.
   
  0.985
Mrps25
28S ribosomal protein S25, mitochondrial.
   
 0.985
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.