STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgrrf1Cell growth regulator with RING finger domain protein 1 isoform X1. (332 aa)    
Predicted Functional Partners:
Rnft1
RING finger and transmembrane domain-containing protein 1.
      
 0.487
Gmfb
Glia maturation factor beta isoform X1.
      
 0.452
Cgref1
Cell growth regulator with EF hand domain protein 1.
      
 0.452
Cnih1
Protein cornichon homolog 1.
      
 0.416
Slc19a2
Solute carrier family 19 (thiamine transporter), member 2/3.
      
 0.414
Znrf4
E3 ubiquitin-protein ligase ZNRF4.
    
 
 0.406
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.