STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GzmeGranzyme H (cathepsin G-like 2). (248 aa)    
Predicted Functional Partners:
Gzmd
Granzyme H (cathepsin G-like 2).
  
   
0.949
Gzmg
Granzyme H (cathepsin G-like 2).
  
 
0.544
Elane
Neutrophil elastase.
  
0.536
Prtn3
Myeloblastin.
  
0.532
Ctrb1
Chymotrypsinogen B.
  
0.510
Met
Hepatocyte growth factor receptor isoform X1.
    
 0.498
Mst1r
Macrophage-stimulating protein receptor isoform X1.
    
 0.498
Gzmf
Granzyme F isoform X1.
  
  
0.480
Prf1
Perforin 1.
   
 0.471
Ctrl
Chymotrypsin-like protease CTRL-1.
  
0.455
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.