STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NalcnSodium leak channel non-selective protein. (1739 aa)    
Predicted Functional Partners:
Unc80
Protein unc-80 homolog isoform X1.
   
 0.998
Unc79
Protein unc-79 homolog isoform X1.
   
 0.998
Fam155a
Transmembrane protein FAM155A isoform X1.
   
 
 0.978
Tmem28
Transmembrane protein FAM155B.
   
 
 0.835
Scn1b
Voltage-gated sodium channel type I beta.
   
 0.595
Wdr35
WD repeat-containing protein 35 isoform X1.
    
 0.585
Ift122
Intraflagellar transport protein 122 homolog isoform X1.
   
 0.573
Scn2b
Voltage-gated sodium channel type II beta.
   
 0.569
Wdr19
WD repeat-containing protein 19.
    
 0.562
Ift140
Intraflagellar transport protein 140 homolog.
    
 0.561
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.