STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbxl7F-box and leucine-rich repeat protein 7. (491 aa)    
Predicted Functional Partners:
Skp1a
S-phase kinase-associated protein 1.
   
 0.966
Cul1
Cullin 1.
    
 0.958
Rbx1
E3 ubiquitin-protein ligase RBX1.
    
 0.931
Cul3
Cullin 3.
    
 0.641
Nedd8
Ubiquitin-like protein Nedd8.
    
 0.588
Aurka
Aurora kinase A isoform X1.
   
 0.555
Commd4
COMM domain-containing protein 4.
   
 0.548
Rps27a
Ubiquitin-small subunit ribosomal protein S27Ae.
    
 0.547
Eloc
Elongin-C.
    
 0.526
Cand1
Cullin-associated NEDD8-dissociated protein 1 isoform X1.
    
 0.502
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.