STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RubcnRun domain Beclin-1-interacting and cysteine-rich domain-containing protein. (956 aa)    
Predicted Functional Partners:
Uvrag
UV radiation resistance-associated gene protein.
    
 0.995
Becn1
Beclin-1.
    
 
 0.949
Pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3 isoform X1.
    
 
 0.918
Pik3r4
Phosphoinositide-3-kinase, regulatory subunit 4.
    
 
 0.814
Gm38100
Beclin-2.
    
 
 0.782
Atg14
Beclin 1-associated autophagy-related key regulator.
    
 
 0.749
Ambra1
Activating molecule in BECN1-regulated autophagy protein 1 isoform X1.
   
 
 0.734
Sh3glb1
SH3 domain containing GRB2 like, endophilin B1.
      
 0.572
Atg5
Autophagy-related protein 5.
   
  
 0.502
Rb1cc1
RB1-inducible coiled-coil protein 1 isoform X1.
   
  
 0.490
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.