STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arrdc5Arrestin domain-containing protein 5. (325 aa)    
Predicted Functional Partners:
Tex38
Testis-expressed protein 38 isoform X1.
      
 0.556
Nedd4
E3 ubiquitin-protein ligase NEDD4.
    
 0.550
Wwp2
NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X1.
    
 0.544
Meig1
Meiosis expressed gene 1 protein homolog isoform X1.
      
 0.538
Nme8
Thioredoxin domain-containing protein 3.
    
 0.478
Actl7b
Actin-like protein 7B.
   
 
 0.466
Odf4
Outer dense fiber protein 4 isoform X1.
      
 0.463
Arrdc4
Arrestin domain-containing protein 4.
      
 0.456
Meikin
Meiosis-specific kinetochore protein.
      
 0.454
M1ap
Meiosis 1 arrest protein isoform X1.
      
 0.454
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.