STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rpl36Large subunit ribosomal protein L36e. (105 aa)    
Predicted Functional Partners:
Fau-2
Ubiquitin-like protein fubi and ribosomal protein S30.
   
 0.997
Fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.997
Rps28
Small subunit ribosomal protein S28e.
   
 0.990
Rps26
Small subunit ribosomal protein S26e.
   
 0.988
Rpl8
Large subunit ribosomal protein L8e.
   
 0.988
Rpl19
Large subunit ribosomal protein L19e.
   
 0.986
Rpl32
Large subunit ribosomal protein L32e.
   
 0.986
Rpl18
Large subunit ribosomal protein L18e.
   
 0.986
MGP_CAROLIEiJ_P0017299
Large subunit ribosomal protein L31e.
   
 0.985
Rps23
Small subunit ribosomal protein S23e.
   
 0.985
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.