STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ranbp3RAN binding protein 3. (491 aa)    
Predicted Functional Partners:
Xpo1
Exportin-1 isoform X1.
    
 
 0.813
Exosc10
Exosome complex exonuclease RRP6.
   
    0.807
Ccar2
Cell cycle and apoptosis regulator protein 2 isoform X1.
   
    0.802
Rcc1
Regulator of chromosome condensation isoform X1.
    
 
 0.772
Kpna4
Importin subunit alpha-3 isoform X1.
   
 
 0.770
Ranbp1
Ran-specific GTPase-activating protein.
   
 0.690
Nup214
Nuclear pore complex protein Nup214 isoform X1.
     
 0.662
Kpna3
Importin subunit alpha-4 isoform X1.
   
 
 0.622
Rae1
MRNA export factor.
   
 
 0.616
Smad2
Mothers against decapentaplegic homolog 2 isoform X1.
    
 
 0.587
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.