STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Wdr38WD repeat-containing protein 38 isoform X1. (304 aa)    
Predicted Functional Partners:
Rbbp5
Retinoblastoma-binding protein 5 isoform X1.
   
 0.770
Ash2l
Set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X1.
   
 0.768
Cxxc1
CXXC-type zinc finger protein 1 isoform X1.
   
 0.691
Unc79
Protein unc-79 homolog isoform X1.
    
 0.685
Wdr82
WD repeat-containing protein 82.
  
0.650
Setd1b
[histone H3]-lysine4 N-trimethyltransferase SETD1.
   
 0.639
Setd1a
[histone H3]-lysine4 N-trimethyltransferase SETD1.
   
 0.639
Kansl2
KAT8 regulatory NSL complex subunit 2 isoform X1.
    
 0.612
Rsph14
Radial spoke head 14 homolog.
   
 
 0.609
Usp51
Ubiquitin carboxyl-terminal hydrolase 22/27/51.
    
 0.607
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.