STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xirp2Xin actin-binding repeat-containing protein 2 isoform X1. (3785 aa)    
Predicted Functional Partners:
Rps27a
Ubiquitin-small subunit ribosomal protein S27Ae.
    
 0.764
Nedd8
Ubiquitin-like protein Nedd8.
   
 0.654
Senp8
Sentrin-specific protease 8.
    
 0.570
Zfand4-2
AN1-type zinc finger and ubiquitin domain-containing protein 1.
    
 0.529
Zfand4
Zinc finger AN1-type containing 4.
    
 0.529
MGP_CAROLIEiJ_P0029456
annotation not available
    
 0.523
MGP_CAROLIEiJ_P0082901
annotation not available
    
 0.523
MGP_CAROLIEiJ_P0082902
annotation not available
    
 0.523
Uba52
Ubiquitin-large subunit ribosomal protein L40e.
    
 0.523
Kxd1
KxDL motif-containing protein 1 isoform X1.
    
 0.523
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.