STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
4930402H24RikUncharacterized protein C20orf194 homolog isoform X1. (1178 aa)    
Predicted Functional Partners:
Dipk1b
Protein FAM69B isoform X1.
      
 0.666
2610301B20Rik
Protein C8orf37 homolog.
      
 0.570
Chpf
Chondroitin polymerizing factor.
      
 0.551
Cmtm6
CKLF-like MARVEL transmembrane domain-containing protein 6.
      
 0.522
Galnt2
Polypeptide N-acetylgalactosaminyltransferase 2 isoform X1.
      
 0.461
Dynlt1-2
Dynein light chain Tctex-type 1.
    
 
 0.437
Dynlt1
Dynein light chain Tctex-type 1.
    
 
 0.437
Dynlt3
Dynein light chain Tctex-type 1.
    
 
 0.437
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.