STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ChgbSecretogranin-1. (673 aa)    
Predicted Functional Partners:
Chga
Chromogranin-A.
   
 
 0.974
Scg2
Secretogranin-2 isoform X1.
   
  
 0.873
Scg3
Secretogranin-3 isoform X1.
   
  
 0.673
Scg5
Neuroendocrine protein 7B2.
   
  
 0.631
Pcsk1n
ProSAAS.
   
  
 0.596
Vgf
Neurosecretory protein VGF.
   
 
 0.579
Pcsk2
Proprotein convertase subtilisin/kexin type 2.
   
  
 0.566
Npy
Pro-neuropeptide Y.
      
 0.560
Dnajc5
DnaJ homolog subfamily C member 5.
    
 0.535
Cpe
Carboxypeptidase E.
      
 0.526
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.