STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pcmtd2Protein-L-isoaspartate O-methyltransferase domain-containing protein 2. (333 aa)    
Predicted Functional Partners:
Vwc2l
Von Willebrand factor C domain-containing protein 2-like isoform X1.
      
 0.642
Coro6
Coronin-1B/1C/6.
   
 
 0.570
Pnrc2
Proline-rich nuclear receptor coactivator 2.
      
 0.461
Tspoap1
Peripheral-type benzodiazepine receptor-associated protein 1 isoform X1.
      
 0.457
Eid1
EP300-interacting inhibitor of differentiation 1.
      
 0.454
Gart
Trifunctional purine biosynthetic protein adenosine-3.
     
 0.407
Cul5
Cullin 5.
    
 
 0.402
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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