STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trim59Tripartite motif-containing protein 59. (403 aa)    
Predicted Functional Partners:
Ecsit
ECSIT signaling integrator.
   
 
 0.732
Ift80
Intraflagellar transport protein 80 homolog.
 
  
 0.517
Trp53
Cellular tumor antigen p53 isoform X1.
   
 0.499
Trim66
Tripartite motif-containing protein 66 isoform X1.
      
 0.499
Trim44
Tripartite motif-containing protein 44.
    
 0.480
Rps27a
Ubiquitin-small subunit ribosomal protein S27Ae.
    
  0.420
Trim29
Tripartite motif-containing protein 29.
      
 0.418
Efcab5
EF-hand calcium-binding domain-containing protein 5.
    
 0.401
Trim67
Tripartite motif-containing protein 67 isoform X1.
   
 
 0.401
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.