STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mindy1Ubiquitin carboxyl-terminal hydrolase MINDY-1/2. (465 aa)    
Predicted Functional Partners:
Rps27a
Ubiquitin-small subunit ribosomal protein S27Ae.
    
   0.708
Setd3
Histone-lysine N-methyltransferase setd3 isoform X1.
    
 0.560
Mmut
Methylmalonyl-CoA mutase, mitochondrial.
    
 0.560
MGP_CAROLIEiJ_P0029456
annotation not available
   
   0.516
MGP_CAROLIEiJ_P0082901
annotation not available
   
   0.516
MGP_CAROLIEiJ_P0082902
annotation not available
   
   0.516
Kxd1
KxDL motif-containing protein 1 isoform X1.
   
   0.516
Fam163a
Protein FAM163A.
      
 0.461
Dhx32
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32.
      
 0.457
Prrg1
Transmembrane gamma-carboxyglutamic acid protein 1.
      
 0.456
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.