Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cfap221 | Cpne3 | MGP_CAROLIEiJ_P0019498 | MGP_CAROLIEiJ_P0061528 | Cilia- and flagella-associated protein 221. | Copine-3. | 0.400 |
Cpne3 | Cfap221 | MGP_CAROLIEiJ_P0061528 | MGP_CAROLIEiJ_P0019498 | Copine-3. | Cilia- and flagella-associated protein 221. | 0.400 |
Cpne3 | MGP_CAROLIEiJ_P0085342 | MGP_CAROLIEiJ_P0061528 | MGP_CAROLIEiJ_P0085342 | Copine-3. | annotation not available | 0.537 |
Cpne3 | Plekhf2 | MGP_CAROLIEiJ_P0061528 | MGP_CAROLIEiJ_P0061409 | Copine-3. | Pleckstrin homology domain-containing family F member 2. | 0.418 |
Cpne3 | Rnaseh2b | MGP_CAROLIEiJ_P0061528 | MGP_CAROLIEiJ_P0037066 | Copine-3. | Ribonuclease H2, subunit B. | 0.588 |
MGP_CAROLIEiJ_P0085342 | Cpne3 | MGP_CAROLIEiJ_P0085342 | MGP_CAROLIEiJ_P0061528 | annotation not available | Copine-3. | 0.537 |
MGP_CAROLIEiJ_P0085342 | Rnaseh2b | MGP_CAROLIEiJ_P0085342 | MGP_CAROLIEiJ_P0037066 | annotation not available | Ribonuclease H2, subunit B. | 0.999 |
Plekhf2 | Cpne3 | MGP_CAROLIEiJ_P0061409 | MGP_CAROLIEiJ_P0061528 | Pleckstrin homology domain-containing family F member 2. | Copine-3. | 0.418 |
Rnaseh2b | Cpne3 | MGP_CAROLIEiJ_P0037066 | MGP_CAROLIEiJ_P0061528 | Ribonuclease H2, subunit B. | Copine-3. | 0.588 |
Rnaseh2b | MGP_CAROLIEiJ_P0085342 | MGP_CAROLIEiJ_P0037066 | MGP_CAROLIEiJ_P0085342 | Ribonuclease H2, subunit B. | annotation not available | 0.999 |