STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NfibNuclear factor 1 B-type isoform X1. (570 aa)    
Predicted Functional Partners:
Nf1
Neurofibromin.
      
 0.666
Mtap
S-methyl-5'-thioadenosine phosphorylase.
    
 
 0.575
Nfix
Nuclear factor 1 X-type isoform X1.
  
  
0.572
Mpdz
Multiple PDZ domain protein isoform X1.
   
  
 0.571
Cebpg
CCAAT/enhancer binding protein (C/EBP), gamma.
      
 0.564
Ttc39b
Tetratricopeptide repeat protein 39B isoform X1.
      
 0.562
Snapc3
SnRNA-activating protein complex subunit 3 isoform X1.
      
 0.561
Cebpa
CCAAT/enhancer binding protein (C/EBP), alpha.
      
 0.560
Hnf1a
Transcription factor 1, hepatocyte nuclear factor 1-alpha.
      
 0.558
Nfic
Nuclear factor 1 C-type isoform X1.
   
 
0.548
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.