STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gpn2GPN-loop GTPase 2 isoform X1. (310 aa)    
Predicted Functional Partners:
Gpn1
GPN-loop GTPase 1.
    
 
0.887
Rpap1
RNA polymerase II-associated protein 1.
    
 
 0.836
Itsn2
Intersectin-2.
    
 0.828
Polr2b
DNA-directed RNA polymerase II subunit RPB2.
    
 
 0.814
Polr2c
DNA-directed RNA polymerase II subunit RPB3.
   
 
 0.782
Itsn1
Intersectin-1.
    
 0.754
Polr2j
DNA-directed RNA polymerase II subunit RPB11-a.
    
 
 0.731
Polr2l
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
    
 0.690
Rpap2
Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1.
   
  
 0.619
Upk3bl
Uroplakin-3b-like protein.
    
 
 0.589
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.