Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Elane | Padi3 | MGP_CAROLIEiJ_P0023785 | MGP_CAROLIEiJ_P0065512 | Neutrophil elastase. | Protein-arginine deiminase type-3. | 0.412 |
Flg | MGP_CAROLIEiJ_P0058958 | MGP_CAROLIEiJ_P0058953 | MGP_CAROLIEiJ_P0058958 | Filaggrin-like. | annotation not available | 0.614 |
Flg | Padi3 | MGP_CAROLIEiJ_P0058953 | MGP_CAROLIEiJ_P0065512 | Filaggrin-like. | Protein-arginine deiminase type-3. | 0.502 |
MGP_CAROLIEiJ_P0058958 | Flg | MGP_CAROLIEiJ_P0058958 | MGP_CAROLIEiJ_P0058953 | annotation not available | Filaggrin-like. | 0.614 |
MGP_CAROLIEiJ_P0058958 | Padi3 | MGP_CAROLIEiJ_P0058958 | MGP_CAROLIEiJ_P0065512 | annotation not available | Protein-arginine deiminase type-3. | 0.578 |
MGP_CAROLIEiJ_P0058958 | S100a3 | MGP_CAROLIEiJ_P0058958 | MGP_CAROLIEiJ_P0058881 | annotation not available | Protein S100-A3. | 0.443 |
Padi3 | Elane | MGP_CAROLIEiJ_P0065512 | MGP_CAROLIEiJ_P0023785 | Protein-arginine deiminase type-3. | Neutrophil elastase. | 0.412 |
Padi3 | Flg | MGP_CAROLIEiJ_P0065512 | MGP_CAROLIEiJ_P0058953 | Protein-arginine deiminase type-3. | Filaggrin-like. | 0.502 |
Padi3 | MGP_CAROLIEiJ_P0058958 | MGP_CAROLIEiJ_P0065512 | MGP_CAROLIEiJ_P0058958 | Protein-arginine deiminase type-3. | annotation not available | 0.578 |
Padi3 | S100a3 | MGP_CAROLIEiJ_P0065512 | MGP_CAROLIEiJ_P0058881 | Protein-arginine deiminase type-3. | Protein S100-A3. | 0.433 |
S100a3 | MGP_CAROLIEiJ_P0058958 | MGP_CAROLIEiJ_P0058881 | MGP_CAROLIEiJ_P0058958 | Protein S100-A3. | annotation not available | 0.443 |
S100a3 | Padi3 | MGP_CAROLIEiJ_P0058881 | MGP_CAROLIEiJ_P0065512 | Protein S100-A3. | Protein-arginine deiminase type-3. | 0.433 |