STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Wdr19WD repeat-containing protein 19. (1341 aa)    
Predicted Functional Partners:
Ift140
Intraflagellar transport protein 140 homolog.
    
 0.999
Ift122
Intraflagellar transport protein 122 homolog isoform X1.
   
0.998
Wdr35
WD repeat-containing protein 35 isoform X1.
   
 0.996
Ift43
Intraflagellar transport 43.
    
 0.994
Ttc21b
Tetratricopeptide repeat protein 21B isoform X1.
   
 0.994
Ift80
Intraflagellar transport protein 80 homolog.
   
 0.965
Ift52
Intraflagellar transport protein 52 homolog.
  
  
 0.957
MGP_CAROLIEiJ_P0067375
Intraflagellar transport protein 172 homolog.
   
 
 0.950
Ift88
Intraflagellar transport protein 88 homolog.
   
 
 0.938
Ttc26
Intraflagellar transport protein 56.
   
 
 0.938
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.