STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rpl6Large subunit ribosomal protein L6e. (296 aa)    
Predicted Functional Partners:
Fau-2
Ubiquitin-like protein fubi and ribosomal protein S30.
   
 0.993
Fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.993
Rpl7
Large subunit ribosomal protein L7e.
  
 0.981
Rpl26
60S ribosomal protein L26 isoform X1.
  
 0.979
Rpl23a
Large subunit ribosomal protein L23Ae.
  
 0.977
Rpl5
60S ribosomal protein L5 isoform X1.
  
 0.977
Rpl8
Large subunit ribosomal protein L8e.
  
 0.976
MGP_CAROLIEiJ_P0017299
Large subunit ribosomal protein L31e.
   
 0.974
Rpl18
Large subunit ribosomal protein L18e.
  
 0.974
Rpl4
Large subunit ribosomal protein L4e.
  
 0.974
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.