STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taf6Transcription initiation factor TFIID subunit 6. (678 aa)    
Predicted Functional Partners:
Taf5
Transcription initiation factor TFIID subunit 5.
   
 0.998
Taf10
Transcription initiation factor TFIID subunit 10.
    
 0.998
Taf2
Transcription initiation factor TFIID subunit 2.
    
 0.997
Tbp
Transcription initiation factor TFIID TATA-box-binding protein.
   
 0.997
Taf11
Transcription initiation factor TFIID subunit 11.
    
 0.997
Taf8
Transcription initiation factor TFIID subunit 8 isoform X1.
    
 0.996
Taf13
Transcription initiation factor TFIID subunit 13.
    
 0.996
Taf9b
Transcription initiation factor TFIID subunit 9B.
   
 0.996
Taf4b
Transcription initiation factor TFIID subunit 4B.
    
 0.995
Taf1
Transcription initiation factor TFIID subunit 1.
    
 0.995
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.