STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amz1Archaemetzincin-1. (504 aa)    
Predicted Functional Partners:
Maneal
Glycoprotein endo-alpha-1,2-mannosidase-like protein isoform X1.
      
 0.560
9330159F19Rik
Uncharacterized protein KIAA0408 homolog.
      
 0.491
Sel1l3
Protein sel-1 homolog 3.
      
 0.489
Ccdc71
Coiled-coil domain-containing protein 71.
      
 0.485
Spryd7
SPRY domain-containing protein 7 isoform X1.
      
 0.463
Ftsj3
AdoMet-dependent rRNA methyltransferase SPB1.
      
 0.400
Mxra8
Matrix remodeling-associated protein 8.
      
 0.400
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.