STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Camk1Calcium/calmodulin-dependent protein kinase type 1. (374 aa)    
Predicted Functional Partners:
Calml3
Calmodulin-like protein 3.
   
 0.954
LOC110308601
Calmodulin-4.
   
 0.954
Calm2
Calmodulin.
   
 0.945
Calml4
Calmodulin-like protein 4 isoform X1.
   
 0.922
Nos3
Nitric oxide synthase, endothelial.
   
 0.909
MGP_CAROLIEiJ_P0033578
annotation not available
   
 0.876
Calm3
Calmodulin.
   
 0.850
Calm1
Calmodulin.
   
 0.812
Atf1
Cyclic AMP-dependent transcription factor ATF-1.
    
 0.732
Atf4
Cyclic AMP-dependent transcription factor ATF-4.
   
  0.684
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.