STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ergic2Endoplasmic reticulum-Golgi intermediate compartment protein 2. (377 aa)    
Predicted Functional Partners:
Ergic3
Endoplasmic reticulum-Golgi intermediate compartment protein 3.
   
0.987
Gtpbp3
TRNA modification GTPase GTPBP3, mitochondrial.
  
 0.911
Derl2
Derlin-2/3.
   
 
 0.737
Derl3
Derlin-3 isoform X1.
   
 
 0.719
Sel1l
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
 
 0.707
Sel1l2
Protein sel-1 homolog 2 isoform X1.
   
 
 0.704
Sel1l3
Protein sel-1 homolog 3.
   
 
 0.701
Trmu
TRNA-5-taurinomethyluridine 2-sulfurtransferase.
  
 0.692
Casc1
Cancer susceptibility candidate protein 1.
      
 0.666
Scrn3
Secernin-3.
      
 0.554
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.