STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CnfnCornifelin isoform X1. (124 aa)    
Predicted Functional Partners:
Trip12
E3 ubiquitin-protein ligase TRIP12 isoform X1.
   
 0.838
Rps27a
Ubiquitin-small subunit ribosomal protein S27Ae.
   
 0.691
Zfand4-2
AN1-type zinc finger and ubiquitin domain-containing protein 1.
   
 0.663
Zfand4
Zinc finger AN1-type containing 4.
   
 0.663
Krtdap
Keratinocyte differentiation-associated protein isoform X1.
   
  
 0.663
Birc6
Baculoviral IAP repeat-containing protein 6 isoform X1.
   
 0.646
Ube2v1
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.617
LOC110284278
Plasmanylethanolamine desaturase.
   
 0.617
Tgm3
Protein-glutamine gamma-glutamyltransferase E.
   
  
 0.601
Traf7
E3 ubiquitin-protein ligase TRAF7 isoform X1.
    
 0.600
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.