STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Syngr4Synaptogyrin-4 isoform X1. (233 aa)    
Predicted Functional Partners:
Synpr
Synaptoporin isoform X1.
   
 
 0.593
Syp
Synaptophysin.
   
 
 0.574
Plekhb1
Pleckstrin homology domain-containing family B member 1 isoform X1.
      
 0.556
Sv2a
MFS transporter, VNT family, synaptic vesicle glycoprotein 2.
      
 0.524
Rab3a
Ras-related protein Rab-3A isoform X1.
   
  
 0.506
Syt1
Synaptotagmin-1 isoform X1.
   
  
 0.469
Syn3
Synapsin-3 isoform X1.
   
  
 0.462
Tex26
Testis-expressed protein 26 isoform X1.
      
 0.452
Syn2
Synapsin-2 isoform X1.
   
  
 0.410
Syn1
Synapsin-1 isoform X1.
   
  
 0.404
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.