STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Atp10aProbable phospholipid-transporting ATPase VA. (1508 aa)    
Predicted Functional Partners:
Tmem30a
Cell cycle control protein 50A isoform X1.
   
 0.928
Tmem30b
Cell cycle control protein 50B.
   
 0.893
Atp8a1
Phospholipid-transporting ATPase IA isoform X1.
     
0.830
Atp11a
Probable phospholipid-transporting ATPase IH.
     
0.817
Atp11b
Probable phospholipid-transporting ATPase IF.
     
0.772
Atp11c
Phospholipid-transporting ATPase IG isoform X1.
     
0.772
Tmem30c
Cell cycle control protein 50C.
   
 0.715
Atp8a2
Phospholipid-transporting ATPase IB isoform X1.
     
0.671
Ube3a
Ubiquitin-protein ligase E3A isoform X1.
    
 
 0.655
Magel2
MAGE-like protein 2.
      
 0.602
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.