STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rps15a40S ribosomal protein S15a isoform X1. (130 aa)    
Predicted Functional Partners:
Rps12
Small subunit ribosomal protein S12e.
  
 0.999
Rps15
Small subunit ribosomal protein S15e.
  
 0.999
Rps26
Small subunit ribosomal protein S26e.
   
 0.999
Rps23
Small subunit ribosomal protein S23e.
  
 0.999
Rps24
40S ribosomal protein S24 isoform X1.
   
 0.999
Rps10
Small subunit ribosomal protein S10e.
   
 0.999
Rps28
Small subunit ribosomal protein S28e.
   
 0.999
Rps18
Small subunit ribosomal protein S18e.
  
 0.999
Rps20
Small subunit ribosomal protein S20e.
  
 0.999
Rps8
Small subunit ribosomal protein S8e.
   
 0.999
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.