STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acsm1Medium-chain acyl-CoA ligase / lipoate-activating enzyme. (531 aa)    
Predicted Functional Partners:
Acads
Short-chain specific acyl-CoA dehydrogenase, mitochondrial.
  
 
 0.932
Lipt1
Lipoyltransferase 1, mitochondrial.
   
 
 0.929
Mbl1
Mannose-binding protein A.
   
    0.717
Hsdl2
Hydroxysteroid dehydrogenase-like protein 2.
  
 
 0.640
Csl
Citrate synthase like.
  
 0.639
Cs
Citrate synthase, mitochondrial.
  
 0.639
Acsf2
Acyl-CoA synthetase family member 2, mitochondrial.
 
0.545
Slc22a16
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 16.
   
 
 0.508
Gbp5
Guanylate-binding protein 5.
    
   0.504
Adhfe1
Hydroxyacid-oxoacid transhydrogenase, mitochondrial isoform X1.
   
 
 0.502
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.