STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FbrsProbable fibrosin-1. (980 aa)    
Predicted Functional Partners:
Pcgf5
Polycomb group ring finger 5.
    
 0.865
Rnf2
E3 ubiquitin-protein ligase RNF1/2.
    
 0.793
Pcgf3
Polycomb group RING finger protein 3.
    
 0.782
Rybp
RING1 and YY1-binding protein.
    
 0.775
Csnk2a2
Casein kinase II subunit alpha.
    
 0.768
Ring1
E3 ubiquitin-protein ligase RNF1/2.
    
 0.743
Pcgf6
Polycomb group ring finger 6.
    
 0.720
Chek2
Serine/threonine-protein kinase CHEK2.
   
 0.716
Chek1
Serine/threonine-protein kinase Chk1 isoform X1.
   
 0.695
Yaf2
YY1-associated factor 2 isoform X1.
    
 0.669
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.