STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tgfb1i1Transforming growth factor beta-1-induced transcript 1 protein isoform X1. (461 aa)    
Predicted Functional Partners:
Vcl
Vinculin.
   
 0.891
Ptk2b
Protein-tyrosine kinase 2-beta.
    
 0.785
Bcar1
Breast cancer anti-estrogen resistance protein 1 isoform X1.
    
 0.758
Parva
Alpha-parvin isoform X1.
   
 0.745
Tln1
Talin-1.
   
 0.704
Tln2
Talin 2.
   
 0.704
Ptk2
Protein tyrosine kinase 2.
    
 0.697
Ptpn12
Tyrosine-protein phosphatase non-receptor type 12/18/22.
   
 0.684
Parvb
Beta-parvin isoform X1.
   
 0.673
Src
Proto-oncogene tyrosine-protein kinase Src.
   
 0.655
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.