Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cask | Ces1a | MGP_CAROLIEiJ_P0091048 | MGP_CAROLIEiJ_P0085525 | Calcium/calmodulin-dependent serine protein kinase. | Liver carboxylesterase 1-like. | 0.464 |
Cask | Nrxn1 | MGP_CAROLIEiJ_P0091048 | MGP_CAROLIEiJ_P0045858 | Calcium/calmodulin-dependent serine protein kinase. | Neurexin-1 isoform X1. | 0.929 |
Cask | Nrxn2 | MGP_CAROLIEiJ_P0091048 | MGP_CAROLIEiJ_P0047874 | Calcium/calmodulin-dependent serine protein kinase. | Neurexin-2-beta isoform X1. | 0.928 |
Cask | Nrxn3 | MGP_CAROLIEiJ_P0091048 | MGP_CAROLIEiJ_P0033011 | Calcium/calmodulin-dependent serine protein kinase. | Neurexin 3 isoform X1. | 0.928 |
Ces1a | Cask | MGP_CAROLIEiJ_P0085525 | MGP_CAROLIEiJ_P0091048 | Liver carboxylesterase 1-like. | Calcium/calmodulin-dependent serine protein kinase. | 0.464 |
Ces1a | Eno1 | MGP_CAROLIEiJ_P0085525 | MGP_CAROLIEiJ_P0065936 | Liver carboxylesterase 1-like. | Alpha-enolase. | 0.417 |
Ces1a | MGP_CAROLIEiJ_P0042840 | MGP_CAROLIEiJ_P0085525 | MGP_CAROLIEiJ_P0042840 | Liver carboxylesterase 1-like. | annotation not available | 0.417 |
Ces1a | Nrxn1 | MGP_CAROLIEiJ_P0085525 | MGP_CAROLIEiJ_P0045858 | Liver carboxylesterase 1-like. | Neurexin-1 isoform X1. | 0.432 |
Ces1a | Nrxn2 | MGP_CAROLIEiJ_P0085525 | MGP_CAROLIEiJ_P0047874 | Liver carboxylesterase 1-like. | Neurexin-2-beta isoform X1. | 0.432 |
Ces1a | Nrxn3 | MGP_CAROLIEiJ_P0085525 | MGP_CAROLIEiJ_P0033011 | Liver carboxylesterase 1-like. | Neurexin 3 isoform X1. | 0.432 |
Ces1a | Utp20 | MGP_CAROLIEiJ_P0085525 | MGP_CAROLIEiJ_P0024438 | Liver carboxylesterase 1-like. | Small subunit processome component 20 homolog. | 0.425 |
Ces1a | Wdr43 | MGP_CAROLIEiJ_P0085525 | MGP_CAROLIEiJ_P0045597 | Liver carboxylesterase 1-like. | U3 small nucleolar RNA-associated protein 5. | 0.436 |
Eno1 | Ces1a | MGP_CAROLIEiJ_P0065936 | MGP_CAROLIEiJ_P0085525 | Alpha-enolase. | Liver carboxylesterase 1-like. | 0.417 |
MGP_CAROLIEiJ_P0042840 | Ces1a | MGP_CAROLIEiJ_P0042840 | MGP_CAROLIEiJ_P0085525 | annotation not available | Liver carboxylesterase 1-like. | 0.417 |
Nrxn1 | Cask | MGP_CAROLIEiJ_P0045858 | MGP_CAROLIEiJ_P0091048 | Neurexin-1 isoform X1. | Calcium/calmodulin-dependent serine protein kinase. | 0.929 |
Nrxn1 | Ces1a | MGP_CAROLIEiJ_P0045858 | MGP_CAROLIEiJ_P0085525 | Neurexin-1 isoform X1. | Liver carboxylesterase 1-like. | 0.432 |
Nrxn1 | Nrxn2 | MGP_CAROLIEiJ_P0045858 | MGP_CAROLIEiJ_P0047874 | Neurexin-1 isoform X1. | Neurexin-2-beta isoform X1. | 0.933 |
Nrxn1 | Nrxn3 | MGP_CAROLIEiJ_P0045858 | MGP_CAROLIEiJ_P0033011 | Neurexin-1 isoform X1. | Neurexin 3 isoform X1. | 0.944 |
Nrxn2 | Cask | MGP_CAROLIEiJ_P0047874 | MGP_CAROLIEiJ_P0091048 | Neurexin-2-beta isoform X1. | Calcium/calmodulin-dependent serine protein kinase. | 0.928 |
Nrxn2 | Ces1a | MGP_CAROLIEiJ_P0047874 | MGP_CAROLIEiJ_P0085525 | Neurexin-2-beta isoform X1. | Liver carboxylesterase 1-like. | 0.432 |
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