STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CbfbCore-binding factor subunit beta isoform X1. (187 aa)    
Predicted Functional Partners:
Runx1
Runt-related transcription factor 1 isoform X1.
    
 0.999
Runx3
Runt-related transcription factor 3 isoform X1.
    
 0.996
Runx2
Runt-related transcription factor 2 isoform X1.
    
 0.994
Cul5
Cullin 5.
    
 
 0.959
Eloc
Elongin-C.
    
 
 0.957
Elob
Elongin-B.
    
 
 0.938
Hipk2
Homeodomain-interacting protein kinase 2.
     
 0.875
Apobec3
DNA dC->dU-editing enzyme APOBEC-3 isoform X1.
    
 
 0.865
MGP_CAROLIEiJ_P0029144
annotation not available
    
 
 0.863
Ets1
Protein C-ets-1.
    
 0.858
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.