Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bop1 | Brix1 | MGP_CAROLIEiJ_P0038678 | MGP_CAROLIEiJ_P0037867 | Ribosome biogenesis protein BOP1. | Ribosome biogenesis protein BRX1 homolog isoform X1. | 0.996 |
Bop1 | Ftsj3 | MGP_CAROLIEiJ_P0038678 | MGP_CAROLIEiJ_P0030538 | Ribosome biogenesis protein BOP1. | AdoMet-dependent rRNA methyltransferase SPB1. | 0.993 |
Bop1 | Gtpbp4 | MGP_CAROLIEiJ_P0038678 | MGP_CAROLIEiJ_P0033642 | Ribosome biogenesis protein BOP1. | Nucleolar GTP-binding protein 1. | 0.996 |
Bop1 | Kctd19 | MGP_CAROLIEiJ_P0038678 | MGP_CAROLIEiJ_P0085807 | Ribosome biogenesis protein BOP1. | BTB/POZ domain-containing protein KCTD19 isoform X1. | 0.975 |
Bop1 | Mrto4 | MGP_CAROLIEiJ_P0038678 | MGP_CAROLIEiJ_P0065456 | Ribosome biogenesis protein BOP1. | MRNA turnover protein 4 homolog. | 0.993 |
Bop1 | Nifk | MGP_CAROLIEiJ_P0038678 | MGP_CAROLIEiJ_P0019427 | Ribosome biogenesis protein BOP1. | MKI67 FHA domain-interacting nucleolar phosphoprotein. | 0.986 |
Bop1 | Noc2l | MGP_CAROLIEiJ_P0038678 | MGP_CAROLIEiJ_P0066468 | Ribosome biogenesis protein BOP1. | Nucleolar complex protein 2 homolog. | 0.997 |
Bop1 | Nop58 | MGP_CAROLIEiJ_P0038678 | MGP_CAROLIEiJ_P0017877 | Ribosome biogenesis protein BOP1. | Nucleolar protein 58. | 0.979 |
Bop1 | Pes1 | MGP_CAROLIEiJ_P0038678 | MGP_CAROLIEiJ_P0025376 | Ribosome biogenesis protein BOP1. | LOW QUALITY PROTEIN: pescadillo homolog. | 0.999 |
Bop1 | Pwp2 | MGP_CAROLIEiJ_P0038678 | MGP_CAROLIEiJ_P0023650 | Ribosome biogenesis protein BOP1. | Periodic tryptophan protein 2 homolog. | 0.963 |
Brix1 | Bop1 | MGP_CAROLIEiJ_P0037867 | MGP_CAROLIEiJ_P0038678 | Ribosome biogenesis protein BRX1 homolog isoform X1. | Ribosome biogenesis protein BOP1. | 0.996 |
Brix1 | Ftsj3 | MGP_CAROLIEiJ_P0037867 | MGP_CAROLIEiJ_P0030538 | Ribosome biogenesis protein BRX1 homolog isoform X1. | AdoMet-dependent rRNA methyltransferase SPB1. | 0.963 |
Brix1 | Gtpbp4 | MGP_CAROLIEiJ_P0037867 | MGP_CAROLIEiJ_P0033642 | Ribosome biogenesis protein BRX1 homolog isoform X1. | Nucleolar GTP-binding protein 1. | 0.996 |
Brix1 | Kctd19 | MGP_CAROLIEiJ_P0037867 | MGP_CAROLIEiJ_P0085807 | Ribosome biogenesis protein BRX1 homolog isoform X1. | BTB/POZ domain-containing protein KCTD19 isoform X1. | 0.941 |
Brix1 | Mrto4 | MGP_CAROLIEiJ_P0037867 | MGP_CAROLIEiJ_P0065456 | Ribosome biogenesis protein BRX1 homolog isoform X1. | MRNA turnover protein 4 homolog. | 0.991 |
Brix1 | Nifk | MGP_CAROLIEiJ_P0037867 | MGP_CAROLIEiJ_P0019427 | Ribosome biogenesis protein BRX1 homolog isoform X1. | MKI67 FHA domain-interacting nucleolar phosphoprotein. | 0.998 |
Brix1 | Noc2l | MGP_CAROLIEiJ_P0037867 | MGP_CAROLIEiJ_P0066468 | Ribosome biogenesis protein BRX1 homolog isoform X1. | Nucleolar complex protein 2 homolog. | 0.995 |
Brix1 | Nop58 | MGP_CAROLIEiJ_P0037867 | MGP_CAROLIEiJ_P0017877 | Ribosome biogenesis protein BRX1 homolog isoform X1. | Nucleolar protein 58. | 0.945 |
Brix1 | Pes1 | MGP_CAROLIEiJ_P0037867 | MGP_CAROLIEiJ_P0025376 | Ribosome biogenesis protein BRX1 homolog isoform X1. | LOW QUALITY PROTEIN: pescadillo homolog. | 0.989 |
Brix1 | Pwp2 | MGP_CAROLIEiJ_P0037867 | MGP_CAROLIEiJ_P0023650 | Ribosome biogenesis protein BRX1 homolog isoform X1. | Periodic tryptophan protein 2 homolog. | 0.745 |
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