Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Eftud2 | Lsm2 | MGP_CAROLIEiJ_P0030314 | MGP_CAROLIEiJ_P0044369 | 116 kDa U5 small nuclear ribonucleoprotein component isoform X1. | U6 snRNA-associated Sm-like protein LSm2 isoform X1. | 0.954 |
Eftud2 | Lsm5 | MGP_CAROLIEiJ_P0030314 | MGP_CAROLIEiJ_P0074002 | 116 kDa U5 small nuclear ribonucleoprotein component isoform X1. | U6 snRNA-associated Sm-like protein LSm5. | 0.965 |
Eftud2 | Lsm6 | MGP_CAROLIEiJ_P0030314 | MGP_CAROLIEiJ_P0085078 | 116 kDa U5 small nuclear ribonucleoprotein component isoform X1. | U6 snRNA-associated Sm-like protein LSm6. | 0.944 |
Eftud2 | Lsm8 | MGP_CAROLIEiJ_P0030314 | MGP_CAROLIEiJ_P0072747 | 116 kDa U5 small nuclear ribonucleoprotein component isoform X1. | LSM8 homolog, U6 small nuclear RNA associated isoform X1. | 0.989 |
Eftud2 | Prpf31 | MGP_CAROLIEiJ_P0030314 | MGP_CAROLIEiJ_P0077062 | 116 kDa U5 small nuclear ribonucleoprotein component isoform X1. | U4/U6 small nuclear ribonucleoprotein PRP31. | 0.992 |
Eftud2 | Prpf6 | MGP_CAROLIEiJ_P0030314 | MGP_CAROLIEiJ_P0056799 | 116 kDa U5 small nuclear ribonucleoprotein component isoform X1. | Pre-mRNA-processing factor 6. | 0.996 |
Eftud2 | Sart1 | MGP_CAROLIEiJ_P0030314 | MGP_CAROLIEiJ_P0047589 | 116 kDa U5 small nuclear ribonucleoprotein component isoform X1. | U4/U6.U5 tri-snRNP-associated protein 1. | 0.991 |
Eftud2 | Snrnp200 | MGP_CAROLIEiJ_P0030314 | MGP_CAROLIEiJ_P0054416 | 116 kDa U5 small nuclear ribonucleoprotein component isoform X1. | U5 small nuclear ribonucleoprotein 200 kDa helicase. | 0.996 |
Eftud2 | Snrpd3 | MGP_CAROLIEiJ_P0030314 | MGP_CAROLIEiJ_P0023419 | 116 kDa U5 small nuclear ribonucleoprotein component isoform X1. | Small nuclear ribonucleoprotein Sm D3. | 0.990 |
Eftud2 | Txnl4b | MGP_CAROLIEiJ_P0030314 | MGP_CAROLIEiJ_P0085965 | 116 kDa U5 small nuclear ribonucleoprotein component isoform X1. | Thioredoxin-like protein 4B isoform X1. | 0.917 |
Lsm2 | Eftud2 | MGP_CAROLIEiJ_P0044369 | MGP_CAROLIEiJ_P0030314 | U6 snRNA-associated Sm-like protein LSm2 isoform X1. | 116 kDa U5 small nuclear ribonucleoprotein component isoform X1. | 0.954 |
Lsm2 | Lsm5 | MGP_CAROLIEiJ_P0044369 | MGP_CAROLIEiJ_P0074002 | U6 snRNA-associated Sm-like protein LSm2 isoform X1. | U6 snRNA-associated Sm-like protein LSm5. | 0.999 |
Lsm2 | Lsm6 | MGP_CAROLIEiJ_P0044369 | MGP_CAROLIEiJ_P0085078 | U6 snRNA-associated Sm-like protein LSm2 isoform X1. | U6 snRNA-associated Sm-like protein LSm6. | 0.999 |
Lsm2 | Lsm8 | MGP_CAROLIEiJ_P0044369 | MGP_CAROLIEiJ_P0072747 | U6 snRNA-associated Sm-like protein LSm2 isoform X1. | LSM8 homolog, U6 small nuclear RNA associated isoform X1. | 0.999 |
Lsm2 | Prpf31 | MGP_CAROLIEiJ_P0044369 | MGP_CAROLIEiJ_P0077062 | U6 snRNA-associated Sm-like protein LSm2 isoform X1. | U4/U6 small nuclear ribonucleoprotein PRP31. | 0.974 |
Lsm2 | Prpf6 | MGP_CAROLIEiJ_P0044369 | MGP_CAROLIEiJ_P0056799 | U6 snRNA-associated Sm-like protein LSm2 isoform X1. | Pre-mRNA-processing factor 6. | 0.956 |
Lsm2 | Sart1 | MGP_CAROLIEiJ_P0044369 | MGP_CAROLIEiJ_P0047589 | U6 snRNA-associated Sm-like protein LSm2 isoform X1. | U4/U6.U5 tri-snRNP-associated protein 1. | 0.981 |
Lsm2 | Snrnp200 | MGP_CAROLIEiJ_P0044369 | MGP_CAROLIEiJ_P0054416 | U6 snRNA-associated Sm-like protein LSm2 isoform X1. | U5 small nuclear ribonucleoprotein 200 kDa helicase. | 0.979 |
Lsm2 | Snrpd3 | MGP_CAROLIEiJ_P0044369 | MGP_CAROLIEiJ_P0023419 | U6 snRNA-associated Sm-like protein LSm2 isoform X1. | Small nuclear ribonucleoprotein Sm D3. | 0.973 |
Lsm2 | Txnl4b | MGP_CAROLIEiJ_P0044369 | MGP_CAROLIEiJ_P0085965 | U6 snRNA-associated Sm-like protein LSm2 isoform X1. | Thioredoxin-like protein 4B isoform X1. | 0.910 |
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