STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cnn1Calponin-1. (297 aa)    
Predicted Functional Partners:
Myh11
Myosin heavy chain 9/10/11/14.
   
  
 0.866
Actg2
Actin, gamma-enteric smooth muscle.
   
 0.848
Acta2
Actin, aortic smooth muscle.
   
 0.808
Wdr90
WD repeat-containing protein 90.
    
 
 0.731
Acta1
Actin, alpha skeletal muscle isoform X1.
   
 0.705
Calml3
Calmodulin-like protein 3.
   
 0.676
LOC110308601
Calmodulin-4.
   
 0.676
MGP_CAROLIEiJ_P0033578
annotation not available
   
 0.676
Calml4
Calmodulin-like protein 4 isoform X1.
   
 0.676
Lmod1
Leiomodin-1.
   
  
 0.672
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.