STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbx18T-box18. (522 aa)    
Predicted Functional Partners:
Hdac2
Histone deacetylase 1/2.
     
 0.829
Etv3
ETS translocation variant 3.
     
 0.768
Foxo3
Forkhead box protein O3.
     
 0.763
Shox2
Short stature homeobox protein 2 isoform X1.
   
 
 0.721
Ctnnb1
Catenin beta 1.
     
 0.695
Tcf21
Transcription factor 21.
      
 0.643
Nkx2-5
Homeobox protein Nkx-2.5.
    
 
 0.632
Isl1
Insulin gene enhancer protein ISL-1 isoform X1.
    
 
 0.616
Hcn4
Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4.
      
 0.601
Wt1
Wilms tumor protein isoform X1.
      
 0.595
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.