Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cdc42 | Dock11 | MGP_CAROLIEiJ_P0065296 | MGP_CAROLIEiJ_P0091175 | Cell division control protein 42 homolog isoform X1. | Dedicator of cytokinesis protein 9/10/11. | 0.894 |
Cdc42 | Dock2 | MGP_CAROLIEiJ_P0065296 | MGP_CAROLIEiJ_P0026141 | Cell division control protein 42 homolog isoform X1. | Dedicator of cytokinesis protein 2. | 0.703 |
Cdc42 | Met | MGP_CAROLIEiJ_P0065296 | MGP_CAROLIEiJ_P0072689 | Cell division control protein 42 homolog isoform X1. | Hepatocyte growth factor receptor isoform X1. | 0.679 |
Cdc42 | Mst1r | MGP_CAROLIEiJ_P0065296 | MGP_CAROLIEiJ_P0089802 | Cell division control protein 42 homolog isoform X1. | Macrophage-stimulating protein receptor isoform X1. | 0.605 |
Cdc42 | Rac1 | MGP_CAROLIEiJ_P0065296 | MGP_CAROLIEiJ_P0072005 | Cell division control protein 42 homolog isoform X1. | Ras-related C3 botulinum toxin substrate 1. | 0.989 |
Cdc42 | Rac2 | MGP_CAROLIEiJ_P0065296 | MGP_CAROLIEiJ_P0038856 | Cell division control protein 42 homolog isoform X1. | Ras-related C3 botulinum toxin substrate 2. | 0.960 |
Cdc42 | Rac3 | MGP_CAROLIEiJ_P0065296 | MGP_CAROLIEiJ_P0031650 | Cell division control protein 42 homolog isoform X1. | Rac family small GTPase 3. | 0.617 |
Dock11 | Cdc42 | MGP_CAROLIEiJ_P0091175 | MGP_CAROLIEiJ_P0065296 | Dedicator of cytokinesis protein 9/10/11. | Cell division control protein 42 homolog isoform X1. | 0.894 |
Dock11 | Dock2 | MGP_CAROLIEiJ_P0091175 | MGP_CAROLIEiJ_P0026141 | Dedicator of cytokinesis protein 9/10/11. | Dedicator of cytokinesis protein 2. | 0.611 |
Dock11 | Met | MGP_CAROLIEiJ_P0091175 | MGP_CAROLIEiJ_P0072689 | Dedicator of cytokinesis protein 9/10/11. | Hepatocyte growth factor receptor isoform X1. | 0.502 |
Dock11 | Mst1r | MGP_CAROLIEiJ_P0091175 | MGP_CAROLIEiJ_P0089802 | Dedicator of cytokinesis protein 9/10/11. | Macrophage-stimulating protein receptor isoform X1. | 0.502 |
Dock11 | Rac1 | MGP_CAROLIEiJ_P0091175 | MGP_CAROLIEiJ_P0072005 | Dedicator of cytokinesis protein 9/10/11. | Ras-related C3 botulinum toxin substrate 1. | 0.524 |
Dock11 | Rac2 | MGP_CAROLIEiJ_P0091175 | MGP_CAROLIEiJ_P0038856 | Dedicator of cytokinesis protein 9/10/11. | Ras-related C3 botulinum toxin substrate 2. | 0.527 |
Dock11 | Rac3 | MGP_CAROLIEiJ_P0091175 | MGP_CAROLIEiJ_P0031650 | Dedicator of cytokinesis protein 9/10/11. | Rac family small GTPase 3. | 0.664 |
Dock11 | Rhoj | MGP_CAROLIEiJ_P0091175 | MGP_CAROLIEiJ_P0032551 | Dedicator of cytokinesis protein 9/10/11. | Rho-related GTP-binding protein RhoJ. | 0.558 |
Dock11 | Rhoq | MGP_CAROLIEiJ_P0091175 | MGP_CAROLIEiJ_P0045787 | Dedicator of cytokinesis protein 9/10/11. | Rho-related GTP-binding protein RhoQ. | 0.494 |
Dock11 | Ssmem1 | MGP_CAROLIEiJ_P0091175 | MGP_CAROLIEiJ_P0073056 | Dedicator of cytokinesis protein 9/10/11. | Serine-rich single-pass membrane protein 1 isoform X1. | 0.526 |
Dock2 | Cdc42 | MGP_CAROLIEiJ_P0026141 | MGP_CAROLIEiJ_P0065296 | Dedicator of cytokinesis protein 2. | Cell division control protein 42 homolog isoform X1. | 0.703 |
Dock2 | Dock11 | MGP_CAROLIEiJ_P0026141 | MGP_CAROLIEiJ_P0091175 | Dedicator of cytokinesis protein 2. | Dedicator of cytokinesis protein 9/10/11. | 0.611 |
Dock2 | Rac1 | MGP_CAROLIEiJ_P0026141 | MGP_CAROLIEiJ_P0072005 | Dedicator of cytokinesis protein 2. | Ras-related C3 botulinum toxin substrate 1. | 0.983 |
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