Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cdkl5 | Dnmt1 | MGP_CAROLIEiJ_P0093256 | MGP_CAROLIEiJ_P0086915 | Cyclin-dependent kinase-like 5. | DNA (cytosine-5)-methyltransferase 1 isoform X1. | 0.567 |
Cdkl5 | Fmr1 | MGP_CAROLIEiJ_P0093256 | MGP_CAROLIEiJ_P0091575 | Cyclin-dependent kinase-like 5. | FMRP translational regulator 1. | 0.426 |
Cdkl5 | Foxg1 | MGP_CAROLIEiJ_P0093256 | MGP_CAROLIEiJ_P0032228 | Cyclin-dependent kinase-like 5. | Forkhead box protein G1. | 0.601 |
Cdkl5 | Kcnq2 | MGP_CAROLIEiJ_P0093256 | MGP_CAROLIEiJ_P0056669 | Cyclin-dependent kinase-like 5. | Potassium voltage-gated channel KQT-like subfamily member 2. | 0.566 |
Cdkl5 | Lrrc4c | MGP_CAROLIEiJ_P0093256 | MGP_CAROLIEiJ_P0053303 | Cyclin-dependent kinase-like 5. | Leucine-rich repeat-containing protein 4C. | 0.495 |
Cdkl5 | Mecp2 | MGP_CAROLIEiJ_P0093256 | MGP_CAROLIEiJ_P0091823 | Cyclin-dependent kinase-like 5. | Methyl-CpG-binding protein 2 isoform X1. | 0.741 |
Cdkl5 | Pcdh19 | MGP_CAROLIEiJ_P0093256 | MGP_CAROLIEiJ_P0092614 | Cyclin-dependent kinase-like 5. | Protocadherin-19 isoform X1. | 0.579 |
Cdkl5 | Scn1a | MGP_CAROLIEiJ_P0093256 | MGP_CAROLIEiJ_P0052052 | Cyclin-dependent kinase-like 5. | Sodium channel protein type 1 subunit alpha isoform X1. | 0.564 |
Cdkl5 | Scn2a | MGP_CAROLIEiJ_P0093256 | MGP_CAROLIEiJ_P0052026 | Cyclin-dependent kinase-like 5. | Sodium channel protein type 2 subunit alpha isoform X1. | 0.505 |
Cdkl5 | Stxbp1 | MGP_CAROLIEiJ_P0093256 | MGP_CAROLIEiJ_P0051220 | Cyclin-dependent kinase-like 5. | Syntaxin-binding protein 1. | 0.561 |
Dnmt1 | Cdkl5 | MGP_CAROLIEiJ_P0086915 | MGP_CAROLIEiJ_P0093256 | DNA (cytosine-5)-methyltransferase 1 isoform X1. | Cyclin-dependent kinase-like 5. | 0.567 |
Dnmt1 | Mecp2 | MGP_CAROLIEiJ_P0086915 | MGP_CAROLIEiJ_P0091823 | DNA (cytosine-5)-methyltransferase 1 isoform X1. | Methyl-CpG-binding protein 2 isoform X1. | 0.910 |
Fmr1 | Cdkl5 | MGP_CAROLIEiJ_P0091575 | MGP_CAROLIEiJ_P0093256 | FMRP translational regulator 1. | Cyclin-dependent kinase-like 5. | 0.426 |
Fmr1 | Mecp2 | MGP_CAROLIEiJ_P0091575 | MGP_CAROLIEiJ_P0091823 | FMRP translational regulator 1. | Methyl-CpG-binding protein 2 isoform X1. | 0.731 |
Fmr1 | Scn1a | MGP_CAROLIEiJ_P0091575 | MGP_CAROLIEiJ_P0052052 | FMRP translational regulator 1. | Sodium channel protein type 1 subunit alpha isoform X1. | 0.570 |
Foxg1 | Cdkl5 | MGP_CAROLIEiJ_P0032228 | MGP_CAROLIEiJ_P0093256 | Forkhead box protein G1. | Cyclin-dependent kinase-like 5. | 0.601 |
Foxg1 | Mecp2 | MGP_CAROLIEiJ_P0032228 | MGP_CAROLIEiJ_P0091823 | Forkhead box protein G1. | Methyl-CpG-binding protein 2 isoform X1. | 0.763 |
Kcnq2 | Cdkl5 | MGP_CAROLIEiJ_P0056669 | MGP_CAROLIEiJ_P0093256 | Potassium voltage-gated channel KQT-like subfamily member 2. | Cyclin-dependent kinase-like 5. | 0.566 |
Kcnq2 | Pcdh19 | MGP_CAROLIEiJ_P0056669 | MGP_CAROLIEiJ_P0092614 | Potassium voltage-gated channel KQT-like subfamily member 2. | Protocadherin-19 isoform X1. | 0.462 |
Kcnq2 | Scn1a | MGP_CAROLIEiJ_P0056669 | MGP_CAROLIEiJ_P0052052 | Potassium voltage-gated channel KQT-like subfamily member 2. | Sodium channel protein type 1 subunit alpha isoform X1. | 0.637 |
page 1 of 3